BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025E07LP1|AL428398
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1754 0.0
>3x_Contig1380
Length = 6718
Score = 1754 bits (885), Expect = 0.0
Identities = 885/885 (100%)
Strand = Plus / Plus
Query: 4 cccattttcccctcgatgctctgtttcgagacccatttgatgaagtattatataataacg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2372 cccattttcccctcgatgctctgtttcgagacccatttgatgaagtattatataataacg 2431
Query: 64 attcccaatttggcaaaaaggtaaacataccggatgggaaaaaaaacacatctacatcac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 attcccaatttggcaaaaaggtaaacataccggatgggaaaaaaaacacatctacatcac 2491
Query: 124 atagccatgtaccgagaaagtctctacatatgctttgaaacatatggaactgtgagggac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2492 atagccatgtaccgagaaagtctctacatatgctttgaaacatatggaactgtgagggac 2551
Query: 184 gttcttcttatttaaaatatcttcatcaaaaactacctcgtagcaagggtctttggtttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2552 gttcttcttatttaaaatatcttcatcaaaaactacctcgtagcaagggtctttggtttt 2611
Query: 244 taagtggctacgtttattaaacgtttaggtaccagaatagcagactcagtcgtccaagca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2612 taagtggctacgtttattaaacgtttaggtaccagaatagcagactcagtcgtccaagca 2671
Query: 304 tcaccacgaactcttcagagttggtagacagtagtaggaaagagagtgtgtgttttattc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2672 tcaccacgaactcttcagagttggtagacagtagtaggaaagagagtgtgtgttttattc 2731
Query: 364 tgcgcatttgagacccggtctttaggcgagactgcacgaagtttacaatcgtggcagtgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2732 tgcgcatttgagacccggtctttaggcgagactgcacgaagtttacaatcgtggcagtgt 2791
Query: 424 ggtatattaacagaagatacacaaggcaattgaagcgaaacgagacaggtataaagcaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2792 ggtatattaacagaagatacacaaggcaattgaagcgaaacgagacaggtataaagcaaa 2851
Query: 484 cgaaaaactagttgcattagatgtcctacttcagtacaccgactaaacagtcgaaatcta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2852 cgaaaaactagttgcattagatgtcctacttcagtacaccgactaaacagtcgaaatcta 2911
Query: 544 cgtacagtccacaatcatgcttgaaacaacaagatatgaacagttcttttcagaaatcac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2912 cgtacagtccacaatcatgcttgaaacaacaagatatgaacagttcttttcagaaatcac 2971
Query: 604 acaaaccctgctcttcgcaagtgcggttctcactcccagtagaagaaagatcaagcgaca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2972 acaaaccctgctcttcgcaagtgcggttctcactcccagtagaagaaagatcaagcgaca 3031
Query: 664 ttgatacaactattgataatgatgaagaaaaccatcctaatagtcactttggacatgaga 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3032 ttgatacaactattgataatgatgaagaaaaccatcctaatagtcactttggacatgaga 3091
Query: 724 aaaatcctcacttcctagattcagacaaatctcatacaagaatgagttgttcaaggtcag 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3092 aaaatcctcacttcctagattcagacaaatctcatacaagaatgagttgttcaaggtcag 3151
Query: 784 agtctcctagcaaaattgtgtatccggcatcgttaaacatgcatgaggaaatgcccacgt 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3152 agtctcctagcaaaattgtgtatccggcatcgttaaacatgcatgaggaaatgcccacgt 3211
Query: 844 ttgttgattattccaagaaagttaacgttcctgtgccgaaagaaa 888
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3212 ttgttgattattccaagaaagttaacgttcctgtgccgaaagaaa 3256
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6481
Number of Sequences: 1807
Number of extensions: 6481
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)